ITK-SNAP

snaplogo-big
SNAP is a software application used to segment structures in 3D medical images. It provides semi-automatic segmentation using active contour methods, as well as manual delineation and image navigation. In addition to these core functions, SNAP provides a number of supporting utilities. SNAP development is led by Paul Yushkevich.
SNAP is open source. Code, binaries and documentation are available at the ITK SNAP home page.